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Genetic Activities/Screening Approaches


The Invasion Signature -
Changes in Gene Expression in Migrating Breast Cancer Cell Lines

Data from John Condeelis Lab

Presented here are data from two invasive and metastatic subpopulations of tumor cells isolated from two different mammary tumor types (PyMT and MTLn3, Lin et al., 2002; Farina et al., 1998), which identify the pattern of gene expression characteristic of the "invasion signature". Data are presented as Expression Ratio for a range of genes identified in this signature. This ratio indicates the level of expression in an invasive compared to a general population of cells of a primary tumor, such that a high number indicated increased expression with invasive behavior.

These data indicate that invasive cancer cells are a population that is neither proliferating nor apoptotic but highly chemotactic to macrophage-secreted EGF. Of particular relevance to the migratory behavior of invasive cancer cells is the finding that the genes coding for pathways leading to the minimum motility machine, (the cofilin, capping protein and Arp2/3 pathways, that regulate -actin polymerization at the leading edge, and the directionality of cell protrusion during chemotaxis to EGF) are coordinately up-regulated. Key genes in the invasion signature have been studied for their ability to alter metastatic outcome and these results confirm the importance of the invasion signature in predicting metastasis (Wang et al., 2004). For further reading in this area go to the publication listing below (link this to the publication listing in the notes section).


MTLn3 invasive data


Additional tables: PyMT Invasive



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MTLn3 invasive data
  GenemRNADescriptionExpression Ratio
1 Rpl15
Aliases: 2510008H07Rik,
MGC107261
mRNA: AW536875
UniGene: Mm.2050
Ribosomal protein L1528.1
2 Cirh1a
Aliases: Cirhin,
Naic,
Teg-292,
Tex292
mRNA: C88094
UniGene: Mm.10665
Cirrhosis, autosomal recessive 1A (human)14.3
3 Nola2
Aliases: 2410130M07Rik,
D11Ertd175e,
Nhp2
mRNA: AI894273
UniGene: Mm.28203
Nucleolar protein family A, member 213.5
4 Cetn2
Aliases: 1110034A02Rik,
AI326150,
Calt,
caltractin
mRNA: AW555456
UniGene: Mm.24643
Centrin 212.4
5 Pctk1
Aliases: Crk5,
Pctaire1
mRNA: AW548322
UniGene: Mm.102574
PCTAIRE-motif protein kinase 112.1
6 Kcnn4
Aliases: IK1,
IKCA1,
KCA4,
SK4,
mIKCa1
mRNA: C86468
UniGene: Mm.9911
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 411
7 6330409N04Rik
mRNA: AU019118
UniGene: Mm.282706
RIKEN cDNA 6330409N04 gene9.3
8 Tk1
Aliases: D530002A18Rik,
Tk-1
mRNA: AA041834
UniGene: Mm.2661
Thymidine kinase 18.5
9 Tera
mRNA: AW536197
UniGene: Mm.18637
Teratocarcinoma expressed, serine rich8.2
10 2900019G14Rik
Aliases: AI159670
mRNA: AW557657
UniGene: Mm.465725
Transcribed locus8.1
11 Rbm39
Aliases: 1500012C14Rik,
2310040E03Rik,
B330012G18Rik,
C79248,
R75070,
Rnpc2,
caper
mRNA: AW537075
UniGene: Mm.392436
RNA binding motif protein 397.9
12 Twistnb
Aliases: 2410173G11,
2810024J17Rik,
D16Wsu83e
mRNA: AA172774
UniGene: Mm.196472
TWIST neighbor7.7
13 Rars
Aliases: 2610011N19Rik,
2610037E21Rik,
AL033339,
AW985894
mRNA: AW543722
UniGene: Mm.284906
Arginyl-tRNA synthetase7.6
14 Psmc6
Aliases: 2300001E01Rik,
AI451058,
MGC151129
mRNA: AU041246
UniGene: Mm.18472
Proteasome (prosome, macropain) 26S subunit, ATPase, 67.6
15 Cldnd1
Aliases: 1110019C08Rik,
AA407103,
AI849195,
AW489850
mRNA: AA209964
UniGene: Mm.29482
Claudin domain containing 17.6
16 Tax1bp1
Aliases: 1200003J11Rik,
1700069J21Rik,
AA930106,
D6Ertd404e,
D6Ertd772e,
T6bp,
TXBP151
mRNA: AW536755
UniGene: Mm.471620
Tax1 (human T-cell leukemia virus type I) binding protein 17.5
17 Zfr
Aliases: C920030H05Rik
mRNA: AU019152
UniGene: Mm.273496
Zinc finger RNA binding protein7.2
18 Hnrnpu
Aliases: AA408410,
AI256620,
AL024194,
AL024437,
AW557595,
C86794,
Hnrpu,
SAFA,
Sp120,
hnRNP U
mRNA: AW554270
UniGene: Mm.426956
Heterogeneous nuclear ribonucleoprotein U7
19 Eif1b
Aliases: 1500010M16Rik,
3110001N14Rik,
Gc20
mRNA: AU024490
UniGene: Mm.28753
Eukaryotic translation initiation factor 1B6.6
20 Sc4mol
Aliases: 1500001G16Rik,
C78600,
DESP4,
ERG25
mRNA: AU018130
UniGene: Mm.30119
Sterol-C4-methyl oxidase-like6.3

Publications & Further Reading

Condeelis J, Singer RH, Segall JE. The great escape: When cancer cells hijack the genes for chemotaxis and motility. Annu Rev Cell Dev Biol. 2005; 21:695-718 PubMed.

Condeelis J, Pollard JW. Macrophages: obligate partners for tumor cell migration, invasion and metastasis. Cell 2006; 124:263-266. PubMed.

Farina KL, Wyckoff JB, Rivera J, Lee H, Segall JE, Condeelis JS, Jones JG. Cell motility of tumor cells visualized in living intact primary tumors using green fluorescent protein. Cancer Res. 1998; 58(12):2528-32. PubMed

Goswami S, Wang W, Wyckoff JB, Condeelis JS. Breast cancer cells isolated by chemotaxis from primary tumors show increased survival and resistance to chemotherapy. Cancer Res. 2004; 64:7664-7667. PubMed

Lin EY, Gouon-Evans V, Nguyen AV, Pollard JW. The macrophage growth factor CSF-1 in mammary gland development and tumor progression. J Mammary Gland Biol Neoplasia. 2002; 7(2):147-62. PubMed

Wang W, Goswami S, Lapidus K, Wells AL, Wyckoff JB, Sahai E, Singer RH, Segall JE, Condeelis JS. Identification and testing of a gene expression signature of invasive carcinoma cells within primary mammary tumors. Cancer Res. 2004;64:8585-8594. PubMed

Wang W, Goswami S, Sahai E, Wyckoff JB, Segall JE, Condeelis JS. Tumor Cells caught in the act of invading: How they revealed their strategy for enhanced cell motility. Trends Cell Biol. 2005;15:138-145. PubMed

Wyckoff JB, Wang Y, Lin EY, Li JF, Goswami S, Stanley ER, Segall JE, Pollard JW, Condeelis J. Direct visualization of macrophage mediated tumor cell intravasation in mammary tumors. Cancer Res. 2007; 67:2649-56. PubMed

Wyckoff J, Wang W, Lin EY, Wang Y, Pixley F, Stanley ER, Graf T, Pollard JW, Segall J, Condeelis J. A paracrine loop between tumor cells and macrophages is required for tumor cell migration in mammary tumors. Cancer Res. 64:7022-7029 PubMed.

Wang W, Wyckoff JB, Goswami S, Wang Y, Sidani M, Segall JE, Condeelis JS. Coordinated regulation of pathways for enhanced cell motility and chemotaxis is conserved in rat and mouse mammary tumors. Cancer Res. 2007; 67:3505-3511. PubMed