Consortium Updates
Welcome to the Cell Migration Consortium's updates page, where we highlight major additions of data and information, and outline some of the publications appearing as a result of the Consortium's activities.
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February 2012
- The actin cytoskeleton in endocytosis: pushing the latest model
- Probing phosphorylation-mediated protein partnerships
- Consortium Data Additions & Site Updates
- Upcoming Conferences & Workshops
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The actin cytoskeleton in endocytosis: pushing the latest model
The actin cytoskeleton is important in clathrin-mediated endocytosis, but a lack of high-resolution data relating to the actin architecture at clathrin-coated structures (CCSs) has precluded elucidation of its exact role in this dynamic process. Collins et al. initially used detergent extraction to expose the cytoskeleton for metal shadowing by platinum replica electron microscopy, and observed CCS-associated actin patches that comprised short branched filaments and resembled small ruffles or comet tails. However, they subsequently studied ‘unroofed’ cells with an intact ventral membrane to avoid the potential loss of shallow pits during detergent extraction. Electron microscopy revealed that CCSs associated with very small lateral actin patches, collar-like and comet-like networks, all of which contained very short and densely branched actin filaments. The use of myosin subfragment 1 to decorate the actin filaments indicated that the barbed ends oriented towards the CCSs to thereby generate a pushing force. Furthermore, the pointed-end sides of the patch appeared to be anchored to a long linear actin filament from the surrounding lamellar cytoskeleton, which potentially functions as a coactivator for the Arp2/3 complex alongside nucleation-promoting factors. Finally, Collins et al. combined platinum replica electron microscopy with electron tomography to show that the very small actin patches most frequently associated with shallow CCSs, the larger actin patches encircled more-invaginated CCSs and the comet-tail-like shapes were linked with the appearance of spherical CCSs. Based on their findings, the authors put forward a model for the initiation, evolution and function of the dendritic actin network at CCSs, the primary role for which is to constrict and elongate the bud neck and drive the endocytosed vesicles from the plasma membrane.
- Collins A, Warrington A, Taylor KA, Svitkina T. Structural organization of the actin cytoskeleton at sites of clathrin-mediated endocytosis. Curr Biol. 2011 Jul 26;21(14):1167-75 PubMed
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Probing phosphorylation-mediated protein partnerships
The cerebral cavernous malformation (CCM) multiprotein complex cell-autonomously regulates the stability of endothelial and epithelial cell–cell junctions, and is therefore important in vascular development. KRIT1 (also known as CCM1) and CCM2 are thought to form the core of this protein complex, but to gain further insight into the mechanism(s) and regulation of complex assembly, Kim et al. attached a tandem affinity purification (TAP) tag to KRIT1/CCM1 to isolate associated proteins. They confirmed previously reported interactions of KRIT1/CCM1 with CCM2, ICAP1α (an integrin-binding protein), and heart of glass (HEG, a transmembrane receptor), before analysing phosphorylation sites within the complex. The only high-stoichiometry phosphorylation site in KRIT1/CCM1 was Ser22, which can be targeted by protein kinase A or casein kinase I. Two lower-stoichiometry phosphorylation sites — at Thr151 and Tyr252 — were also found. Tyr252, which has been implicated in
CCM2 binding and nuclear retention of KRIT1/CCM1, is a putative target of Janus kinase 2. The authors postulate that the phosphorylation of multiple Ser/Thr sites, which they identified throughout CCM2, might regulate the interaction of this core complex component with other proteins. Phosphorylation of Ser164, Ser166 or Ser168 within the phosphotyrosine-binding domain domain might, for example, influence the binding of CCM2 to KRIT1/CCM1. Several phosphorylation sites were identified in the amino-terminal Ser/Thr-rich domain of ICAP1. Phosphorylation of Thr38, which is known to increase the affinity of ICAP1 for integrin β1 and thereby suppress integrin activation by talin, was not detected in this study; however, this could reflect an increased association of ICAP1 with KRIT1/CCM1 in the absence of Thr38 phosphorylation potentially favored by the TAP protocol. No phosphorylation sites were detected in HEG1.
The data associated with this publication can be accessed and manipulated through the Cell Migration Gateway, here http://www.cellmigration.org/resource/proteomics/data/phospho_index.shtml
- Kim J, Sherman NE, Fox JW, Ginsberg MH. Phosphorylation sites in the cerebral cavernous malformations complex. J Cell Sci. 2011 Dec 1;124(Pt 23):3929-32 PubMed
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Consortium Data Additions & Site Updates
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New data posting; Proteomic Analysis of Integrin Associated Complexes
The data published in: JD Humphries, A Byron, MD Bass, SE Craig, JW Pinney, D Knight, MJ Humphries. (2009) "Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6." Science Signaling 2:ra51 PubMed can be accessed and manipulated through the Cell Migration Gateway here www.cellmigration.org/resource/proteomics/humphries/integrin_int.cgi
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Upcoming Conferences & Workshops
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Biophysical Society 2012 Annual Meeting – February 25-29, San Diego, CA:
For more details and to register visit the meeting web site at http://www.biophysics.org/2012meeting/
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January 2012
- A rough guide to sealing-zone dynamics
- Retinal angiogenesis: fibronectin performs a two-fold function
- Other CMC Publications
- Upcoming Conferences & Workshops
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A rough guide to sealing-zone dynamics
Acid and proteolytic enzymes secreted into a ‘resorption lacuna’ mediate the bone-degrading activities of osteoclasts, but degradation lacunae must be sealed and, for resorption to be effective, the ‘sealing zone’ should be continuous and stable over time. However, this ring-like superstructure, which comprises a central ring of filamentous actin that is formed from a network of interlinked podosomes and is surrounded on the inside and outside by integrins and adhesion plaque proteins, varies both in structure and dynamics, depending on the nature of the underlying matrix. To investigate how sealing-zone dynamics are influenced by local topography, Geblinger et al. prepared surfaces with a gradient of roughness values as substrates for osteoclast adhesion. By subjecting a focal series of sealing-zone images of cells to three-dimensional deconvolution, the authors observed that the sealing zone adapted to the surface topography, showing increased integrity and stability with increasing surface roughness. Furthermore, they found that ‘ridge-like barriers’ of up to several micrometers high that were parallel to the perimeter of the sealing-zone could stop its expansion, but that the arrested regions could be ‘pulled’ by neighboring regions extending through obstacle-free areas. When expansion of the ring was restricted in all directions — for example, by steep slopes — the sealing zone became stable and continuous. As the ability of osteoclasts to sense roughness is expressed at wavelengths of over 3 μm, which are larger than the size of an individual podosome, Geblinger et al. propose that topography sensing requires the global mechanical integration of interconnecting podosomes via an actin-based network — podosomes are directly attached to the underlying surface, so differences in the altitudes of neighboring podosomes would be transferred to the cytoskeleton.
- Geblinger D, Zink C, Spencer ND, Addadi L, Geiger B. Effects of surface microtopography on the assembly of the osteoclast resorption apparatus. J R Soc Interface. 2011 Nov 16. [Epub ahead of print]. PubMed
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Retinal angiogenesis: fibronectin performs a two-fold function
During the development of the retinal vascular system, astrocytes guide the leading tips of endothelial cells by depositing a provisional extracellular matrix (ECM). The precise involvement of the major ECM component fibronectin in retinal angiogenesis has so far not been addressed. Stenzel et al. have now shown that fibronectin is expressed and deposited by astrocytes ahead of the growing retinal vasculature in mice, and have taken a genetic approach to elucidate its function. Using Cre-lox-mediated recombination, the authors specifically ablated fibronectin expression in astrocytes ahead of the growing vasculature, causing a decrease in the radial expansion of the vascular plexus through reduced tip-cell migration. Surprisingly, although endothelial cells express both integrin α5 and integrin β1, which mediate binding to fibronectin, endothelium-specific ablation of integrin α5 caused only a marginal reduction in radial migration, suggesting that endothelial α5β1 is not necessary for outgrowth; instead, it supports the alignment and adhesion of filopodia to the astrocytic scaffold. Binding of vascular endothelial growth factor (VEGF) to fibronectin was recently reported to be required for endothelial cell migration, and Stenzel et al. observed that the absence of fibronectin reduced VEGF receptor (VEGFR)2-mediated signaling through phosphoinositide 3-kinase and Akt. They also showed that the blocking peptide FnIII13–14, which inhibits VEGF–fibronectin binding, inhibited endothelial cell migration in cell culture and significantly reduced the radial expansion of retinal vessels when injected intraocularly, coincident with a decrease in phosphorylation of VEGFR2 and Akt. VEGF also interacts with heparan-sulfate proteoglycans, the expression pattern of which resembles that of fibronectin on astrocytes, and the authors showed, using genetic deletion, that both of these ECM components synergize to promote the directional migration of endothelial tip cells. So fibronectin carries out both integrin-binding and growth-factor-binding functions during retinal angiogenesis.
- Stenzel D, Lundkvist A, Sauvaget D, Busse M, Graupera M, van der Flier A, Wijelath ES, Murray J, Sobel M, Costell M, Takahashi S, Fässler R, Yamaguchi Y, Gutmann DH, Hynes RO, Gerhardt H. Integrin-dependent and -independent functions of astrocytic fibronectin in retinal angiogenesis. Development. 2011 Oct;138(20):4451-63. PubMed
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Other CMC Publications
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Karginov AV, Hahn KM. Allosteric Activation of Kinases: Design and Application of RapR Kinases. Curr Protoc Cell Biol 2011; Chapter 14:Unit14 3. PubMed
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Ofer N, Mogilner A, Keren K. Actin disassembly clock determines shape and speed of lamellipodial fragments. Proc Natl Acad Sci U S A 2011; PubMed
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Anderegg F, Geblinger D, Horvath P, Charnley M, Textor M, Addadi L, Geiger B. Substrate adhesion regulates sealing zone architecture and dynamics in cultured osteoclasts. PLoS One 2011; 6 (12):e28583. PubMed
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Ye F, Kim C, Ginsberg MH. Molecular mechanism of inside-out integrin regulation. J Thromb Haemost 2011; 9 Suppl 1:20-5. PubMed
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Upcoming Conferences & Workshops
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Biophysical Society 2012 Annual Meeting – February 25-29, San Diego, CA:
The Early Registration Deadline and Late Abstract submission deadline for this meeting is January 8, 2012. For more details and to register visit the meeting web site at http://www.biophysics.org/2012meeting
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